1. Articles publiés dans des revues internationales à facteurs d’impact

Aboshady, H.M., Mandonnet, N., Félicité, Y. Félicité Y, Hira J, Fourcot A, Barbier C,  Johansson A.-M., Jonas E, Bambou J.-C. (2020) Dynamic transcriptomic changes of goat abomasal mucosa in response to Haemonchus contortus infection. Vet Res 51, 44. https://doi.org/10.1186/s13567-020-00768-y

Aboshady HM, Stear MJ, Johansson A, Jonas E, Bambou J.-C. Immunoglobulins as Biomarkers for Gastrointestinal Nematodes Resistance in Small Ruminants: A systematic review. Sci Rep (2020) 10:7765. doi:10.1038/s41598-020-64775-x

Aldana-Aranda D., Enríquez-Díaz M., Gros O. (2020) Ontogenesis of the digestive gland through planktotrophic stages in Strombus gigas (Mollusca Gastropoda). J Mol Studies. Sous presse.

Aubry, Fabien, Stéphanie Dabo, Caroline Manet, Igor Filipović, Noah H. Rose, Elliott F. Miot, Daria Martynow, Artem Baidaliuk, Sarah H. Merkling, Laura B. Dickson, Anna B. Crist, Victor O. Anyango, Claudia M. Romero-Vivas, Anubis Vega-Rúa, Isabelle Dusfour et al. 2020. “Enhanced Zika Virus Susceptibility of Globally Invasive Aedes Aegypti Populations.” Science 370 (6519): 991–96. https://doi.org/10.1126/science.abd3663

Chaumont H., Etienne P., Roze E., Couratier C., Roger PM., Lannuzel A. Acute meningoencephalitis in a patient with COVID-19. Rev Neurol (Paris). 2020 Jun;176(6):519-521. doi: 10.1016/j.neurol.2020.04.014. Epub 2020 May 11.PMID: 32414534. IF 1.911

Chaumont H., Roze E., Tressières B., Lazarini F., Lannuzel A., Central nervous system infections in a tropical area: influence of emerging and rare infections. Eur J Neurol. 2020 Nov;27(11):2242-2249. doi: 10.1111/ene.14422. Epub 2020 Jul 27.PMID: 32602577. IF 4.516

Chaumont H., San-Galli A., Martino F., Couratier C., Joguet G., Carles M., Roze E., Lannuzel A. Mixed central and peripheral nervous system disorders in severe SARS-CoV-2 infection J Neurol. 2020 Jun 12 : 1–7.  doi: 10.1007/s00415-020-09986-y. IF 3.956

Clé M., Eldin P., Briant L., Lannuzel A., Simonin Y., Van de Perre P., Cabié A., Salinas S.J ; Neurocognitive impacts of arbovirus infections. J Neuroinflammation. 2020 Aug 10;17(1):233. doi: 10.1186/s12974-020-01904-3.PMID: 32778106. Review. IF 5.793

David Couvin, Wilfried Segretier, Erick Stattner, Nalin Rastogi. Novel methods included in SpolLineages tool for fast and precise prediction of Mycobacterium tuberculosis complex spoligotype families. Database (Oxford). 2020. https://doi.org/10.1093/database/baaa108

Duperron S., Beniddir MA., Durand S., Longeon A., Duval C., Gros O., Bernard C.,  Bourguet-Kondracki M-L (2020) New Benthic Cyanobacteria from Guadeloupe Mangroves as Producers of Antimicrobials. Mar Drugs 18(1), 16; https://doi.org/10.3390/md18010016 

Gondard M., Temmam S., Devillers E., Pinarello V., Bigot T., Chrétien D., Aprelon R., Vayssier-Taussat M., Albina E., Eloit M., Moutailler S (2020) RNA Viruses of Amblyomma variegatum and Rhipicephalus microplus and Cattle Susceptibility in the French Antilles. Viruses 12(2), 144.

Gondard M., Delannoy S., Pinarello V., Aprelon R., Devillers E., Galon C., Pradel J., Vayssier-Taussat M., Albina E.,  Moutailler S. (2020) Upscaling the Surveillance of Tick-Borne Pathogens in the French Caribbean Islands. Pathogens 9: 176. https://doi.org/10.3390/pathogens9030176

Gutierrez-Bugallo, Gladys, Antoine Boullis, Yanet Martinez, Lyza Hery, Magdalena Rodriguez, Juan Bisset, and Anubis Vega-Rúa. 2020. “Vector Competence of Aedes Aegypti from Havana , Cuba , for Dengue Virus Type 1 , Chikungunya , and Zika Viruses.” PLoS Negl Trop Dis 14 (12): e0008941.https://doi.org/10.1371/journal.pntd.0008941

Guyomard-Rabenirina S, Reynaud Y, Pot M, Albina E, Couvin D, Ducat C, Gruel G, Ferdinand S, Legreneur P, Le Hello S, Malpote E, Sadikalay S, Talarmin A, Breurec S. (2020) Antimicrobial Resistance in Wildlife in Guadeloupe (French West Indies): Distribution of a Single bla CTX-M-1/IncI1/ST3 Plasmid Among Humans and Wild Animals. Front Microbiol 11, 1524.

Hery L, Guidez A, Durand AA, Delannay C, Normandeau-Guimond J, Reynaud Y, Issaly J, Goindin D, Legrave G, Gustave J, Raffestin S, Breurec S, Constant P, Dusfour I, Guertin C, Vega-Rúa A (2020) Natural Variation in Physicochemical Profiles and Bacterial Communities Associated with Aedes aegypti Breeding Sites and Larvae on Guadeloupe and French Guiana. Microb Ecol. https://doi.org/10.1007/s00248-020-01544-3

Liang PK, Zheng C, Xu XF, Zhao ZZ, Zhao CS, Li CH, Couvin D, Reynaud Y, Zozio T, Rastogi N, Sun Q (2020) Local adaptive evolution of two distinct clades of Beijing and T families of Mycobacterium tuberculosis in Chongqing: a Bayesian population structure and phylogenetic study. Infect Dis Poverty. 9(1):59. https://doi.org/10.1186/s40249-020-00674-7

Marais A, Umber M, Filloux D, Gomez R.-M., Faure C, Pavis C, Julian C, Roumagnac P, Acina Mambome I, Bonheur L, Theil S, Contreras S, Candresse T, Teycheney P.-Y. (2020) Yam asymptomatic virus 1, a novel virus infecting yams (Dioscorea spp.) with significant prevalence in a germplasm collection. Arch Virol. https://doi.org/10.1007/s00705-020-04787-0

Martinez, R.T., Renjifo, D., Cayetano, X., Plaisir Pineau K, Umber M, Teycheney P.-Y (2020) Prevalence and diversity of Banana streak viruses in the Dominican Republic. Trop. plant pathol. 45: 376–384  https://doi.org/10.1007/s40858-020-00334-z

Matthieu Pot, Stéphanie Guyomard-Rabenirina, David Couvin, Célia Ducat, Vincent Enouf, Séverine Ferdinand, Gaëlle Gruel, Edith Malpote, Antoine Talarmin, Sébastien Breurec, Yann Reynaud. Dissemination of ESBL-producing Enterobacter cloacae complex from a hospital to the nearby environment in Guadeloupe (French West Indies): ST114 lineage coding for successful IncHI2/ST1 plasmid. Antimicrobial Agents and Chemotherapy Dec 2020, AAC.02146-20; DOI: https://doi.org/10.1128/AAC.02146-20

Melot B, Bastian S, Dournon N, Valade E, Gorgé O, Le Fleche A, Idier C, Vernier M, Fernandes E, Hoen B, Breurec S, Carles M (2020) Three new cases of Melioidosis, Guadeloupe, French West Indies. Emerg Infect Dis. 26: 617-619.

Meppiel E, Peiffer-Smadja N, Maury A, Bekri I, Delorme C, Desestret V, Gorza L, Hautecloque-Raysz G, Landre S, Lannuzel A, Moulin S, Perrin P, Petitgas P, SellaI F, Wang A, Tattevin P, de Broucker T; contributors to the NeuroCOVID registry. Neurologic manifestations associated with COVID-19: a multicentre registry. Clin Microbiol Infect. 2020 Nov 13:S1198-743X(20)30698-4. doi: 10.1016/j.cmi.2020.11.005. Online ahead of print.PMID: 33189873. IF 7.117

Monti D, Lourenço X, Hubas C, Begarin F, Haouisée A, Romana L, Lefrançois E, Jestin A, Budinski H, Tapie N, Risser T, Mansot J-L, Keith P, Gros O, Lopez P-J, Lauga B (2020) Physical properties of epilithic river biofilm: a new lead to perform pollution bioassessments in overseas territories. Scientific Reports, sous presse

Moussa M, Marcelino I, Richard V, Guerlotté J, Talarmin A (2020) An Optimized Most Probable Number (MPN) Method to Assess the Number of Thermophilic Free-Living Amoebae (FLA) in Water Samples. Pathogens. 9(5):409. https://doi.org/10.3390/pathogens9050409

Pertin, T., Flory, A., Adoue, M., Gustave, J., Romana, L. (2020). Comparison between natural and artificial aging of polyethylene textiles for the design of mosquito-proof shield adapted to tropical environment. Microscopy and Microanalysis 26(S1), 39-40.https://doi.org/10.1017/S1431927620000434

T. Pertin, G. Minatchy, M. Adoue, A. Flory, L. Romana (2020) Investigation of nanoindentation as a fast characterization tool for polymer degradation study. Polymer Testing 81: 106194. https://doi.org/10.1016/j.polymertesting.2019.106194.

Pourcel C, Touchon M, Villeriot N, Vernadet JP, Couvin D, Toffano-Nioche C, Vergnaud G (2020) CRISPRCasdb a successor of CRISPRdb containing CRISPR arrays and cas genes from complete genome sequences, and tools to download and query lists of repeats and spacers. Nucleic Acids Res. 48(D1):D535-D544. https://doi.org/10.1093/nar/gkz915

Reynaud Y, Ducat C, Talarmin A, Marcelino I (2020) Cartography of Free-Living Amoebae in Soil in Guadeloupe (French West Indies) Using DNA Metabarcoding. Pathogens. 9(6):440. https://doi.org/10.3390/pathogens9060440

Rodríguez-Castillo JG, Llerena C, Argoty-Chamorro L, Guerra J, Couvin D, Rastogi N, Murcia MI. (2020) Population structure of multidrug-resistant Mycobacterium tuberculosis clinical isolates in Colombia. Tuberculosis (Edinb). 125:102011. https://doi.org/10.1016/j.tube.2020.102011

Stegmann-Planchard S, Gallian P, Tressières B, Leparc-Goffart I, Lannuzel A, Signaté A, Laouénan C, Cabié A, Hoen B. Chikungunya, a Risk Factor for Guillain-Barré Syndrome. Clin Infect Dis. 2020 Mar 3;70(6):1233-1235. doi: 10.1093/cid/ciz625.PMID: 31290540. IF 8.313

Teycheney PY, Geering ADW, Dasgupta I, Hull R, Kreuze JF, Lockhart B, Muller E, Olszewski N, Pappu N, Pooggin M, Richert-Pöggeler K, Schoelz JE, Seal S, Stavolone L, Umber M (2020). ICTV Virus Taxonomy Profile: Caulimoviridae. Journal of General Virology https://doi.org/10.1099/jgv.0.001497.

Umber M., Filloux D., Gélabale S., Gomez R.M., Marais A., Gallet S., Gamiette F., Pavis C., Teycheney P.-Y. (2020) Molecular viral diagnosis and sanitation of yam genetic resources: implications for safe yam germplasm exchange. Viruses 12: 1101; https://doi.org/10.3390/v12101101

Vega-Rúa A, Marconcini M, Madec Y, Manni M, Carraretto D, Gomulski L, Gasperi G, Failloux AB, Malacrida AR (2020) Vector competence of Aedes albopictus populations for chikungunya virus is shaped by their demographic history. Commun Biol 3: 326. https://doi.org/10.1038/s42003-020-1046-6

2. Poster

Dard D. , Harrois D., Vireeye N., Miossec C., Epelboin L., Nicolas M., Blanchet D., Aubert L., Guyomard S., Mattera M., Demar M., Talarmin A., Desbois-Nogard N.Emergence de l’angiostrongylose neuroméningée à Angiostrongylus cantonensis dans les Départements Français d’Amérique : méfiez-vous des escargots géants !Journées Guyanaises d’infectiologie, février 2021, Cayenne (Guyane)

3. Chapitres d'ouvrages

Teycheney P.Y., Geering, A.D.W, Dasgupta I., Hull R., Kreuze J.F., Lockhart B., Muller E., Olszewski N., Pappu H., Pooggin M., Richert-Pöggeler K.R., Schoelz J.E., Seal S., Stavolone L., Umber M. (2020). Caulimoviridae. Virus taxonomy, the ICTV report on virus classification and taxon nomenclature. https://talk.ictvonline.org/ictv-reports/ictv_online_report/dsdna-viruses/w/caulimoviridae

4. Rapports de stage, mémoires

L. Beauperthuy (2020). Rapport de stage 2ème année: Etude de la transférabilité de gènes de résistance plasmidiques portés par des souches d’Escherichia coli productrices de β-lactamases à spectre étendu isolées chez des bovins de Guadeloupe. Ecole d'Ingénieur, Université Paris Est Créteil –UPEC, 44 p.

P. Duval (2020). Rapport de stage de Master 2 Interaction Microorganismes-Hôtes, Environnement. Transférabilité du microbiote des gîtes larvaires aux larves et adultes Aedes aegypti

R. Léoture (2020). Rapport de stage d’infirmière IADE, IFSI, CHU. Etude de l’effet de la tétracycline et de l’ivermectine sur la croissance de souches d’Escherichia coli productrices de β-lactamases à spectre étendu. 21 p.

V. Moco (2020). Rapport de stage de Master 2 Bioinformatique. Mise en place d’applications de visualisation de données biologiques.